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3V:沃斯体积voxelator,蛋白量计算工具

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Several RNA and protein volume calculation tools including: Cavity Extractor — extracts the cavities for a given probe radius Channel Extractor — extracts a particular channel from the solvent FSV Calculator — calculates the Fractional Solvent Volume Solvent Extractor — extracts the all of the solvent Tunnel Extractor — extracts the ribosomal exit tunnel from the H. marismortui structure VDW Calculator — calculate the van der Waals volume and surface area Volume Calculator — calculate the volume and surface area for any probe radius REFERENCES NR Voss, M Gerstein, TA Steitz, PB Moore. "The geometry of the ribosomal polypeptide exit tunnel." J Mol Biol. v360 (4): 2006, pp. 893-906. download pdf Pubmed ID: 16784753

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