FMTP是一个软件工具,基于约束的指纹数据计算一个物理图谱的MTP(和重叠群)。FMTP完全忽略了由实物图算法获得的克隆排序。
资 源 简 介
Summary
FMTP is a software tool to compute the MTP of a physical map based purely on restriction fingerprint data (and the contigs). FMTP completely ignores the ordering of clones obtained by the physical map algorithm.
Features
Does not require sequence or ordering of clones
Generates MTPs with higher coverage than MTPs by conventional tools
Does not require any commercial tools/libraries
Compatible on Linux and Mac OS X.
FMTP Parameters
FMTP consists of two modules, namely MST and MHS. Most of the parameters are common but there are some parameters unique to each module. Below is the list of parameters and their description. Please note that the scripts in the run_dir directory already use the default parameters to run FMTP. You just need to modify these scripts if you want to change any parameters.
MHS_Module Parameters
-c ct
文 件 列 表
FMTP_v2
.DS_Store
dataset
source