phyutility

Phyutility (fyoo-til-i-te) is a command line program that performs simple analyses or modifications on both trees and data matrices. Makes use of JADE (PEBLS) and JEBL libraries. Please see the NEWS page for info concerning updates, etc. See NEWS and download the new release for amino acid acceptance in the concatenate and cleaning functions (use the -aa argument in -clean and -concat functions). Please use this citation when using Phyutility Smith, S. A. and Dunn, C. W. (2008) Phyutility: a phyloinformatics tool for trees, alignments, and molecular data. Bioinformatics. 24: 715-716 Currently it performs the following functions (to suggest another feature, submit an Issue and use the label Type-Enhancement) : Trees rerooting pruning type conversion conse

phyutility
examples
build.xml
src
phyutility_sm.png
manual.pdf
gpl.txt
phyutility
phyutility.jar