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Introduction
ParaAT (Parallel Alignment and back-Translation, is a parallel tool that parallelly constructs protein-coding DNA alignments for a large number of homologs. ParaAT is well suited for large-scale data analysis in the high-throughput era, providing good scalability and exhibiting high parallel efficiency for computationally demanding tasks.
Documentation & Usage
The resulting alignments can be outputted into different formats, including fasta, axt (for KaKs_Calculator), paml (for PAML), codon and clustal.
Documentation and usage information can be found here.
FAQ
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