资 源 简 介
This page is discontinued.
Go to http://www.ime.unicamp.br/~martinez/lovoalign/
for further information
lovoalign
Lovoalign is a new structural alignment package. The methods used for structural alignment are based on Low Order Value Optimization (LOVO) theory. The use of LOVO theory led to the development of fast convergent algorithms that provide very robust optimization of scoring functions.
Numerical experiments show that the LOVO algorithms implemented here provide the most reliable optimization of the STRUCTAL alignment while being very fast.
Simple input parameters can be used to align two structures, a single structure to a whole database, or to perform an all-on-all database structural alignment.
See http://www.ime.unicamp.br/~martinez/lovoalign
The present site is contains current and previous versions of the package.
The alignment can be highly customized, since any subatom selection o
