lims-systemsgenetics

Background Systems Genetics is the study of the complex relationship between an organism’s DNA sequence (genotype) and resulting traits (phenotype) using large-scale, high-throughput methods. These methods and technologies dictate the need to manage and analyze sequencing, proteomics, metabolomics and transcriptomics and imaging data and workflows. In addition to those needs, it is also important to offer meaningful visualizations, such as familial relationships and integrated views of genomic mutations. These requirements demand for new adaptable and agile design of Lab Information Management Systems (LIMS) that will result in a more usable and research aligned application. (reference) Results We have implemented and deployed a Web 2.0 LIMS application that the Dudley Lab at the Institute of Systems Biology (ISB) is using for its Systems Genetics research project and other lab related data sources and files

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