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hashrf

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  • 上传时间:2021-06-30
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HashRF **Phylogenetic reconstruction techniques are primarily based on computational heuristics and often produce a large number of candidate evolutionary trees. It is necessary to have an efficient method to take these trees as input and return the relationship among them. We design a hash-based algorithm to compute the all-to-all Robinson-Foulds (RF) distance, the most popular measure used for comparing phylogenetic trees.** For more information _See the Wiki tab for more information. For details Seung-Jin Sul, Tiffani L. Williams: An Experimental Analysis of Robinson-Foulds Distance Matrix Algorithms (ESA 2008), pp. 793-804. Seung-Jin Sul and Tiffani L. Williams, "A Randomized Algorithm for Comparing Sets of Phylogenetic Trees," Asia- Pacific Bioinformatics Conference (APBC"07), pp. 121- 130._

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