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Gene-gene interaction filtering with an ensemble of Tuned ReliefF filters
Summary
Providing TuRF-E.pl program for SNP interaction filtering. Could be directly applied to GWA datasets with millions of SNPs. The output could be processed by GEsnpxPara.jar program which generates a list of potential SNP-SNP (gene-gene) or SNP-environment interactions.
Introduction
This project hosts the Perl program for creating an ensemble of tuned ReliefF filters (download TuRF-E\_v1.0.zip) for SNP interaction filtering in genome-wide association (GWA) studies. Please refer to [1] that describe SNP