资 源 简 介
Code and wiki for several bioinformatics projects. Documentations are usually embedded in the source code, while some head-ups can be found in the Wiki pages too.
Mummichog version 1.0 is released!
Blood Transcription Modules
A new tool to analyze blood transcriptome data, alternative to canonical pathways but with detailed immunology (Li et al 2014. Nature Immunology. 15:195). Package and tutorial can be downloaded from Nature site: http://www.nature.com/ni/journal/v15/n2/extref/ni.2789-S5.zip .
Metabolomics
Rapid functional analysis for high throughput, mass spec based metabolomics -
mummichog performs pathway and network analysis without the need of a priori identification of metabolites (Li et al. 2013. PLoS Computational Biology. 9:e10031323).
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