资 源 简 介
Please go to https://bitbucket.org/wsu_bcb/apicoamp for downloading the newest software and documentation.
ApicoAMP: The first computational model for identifying apicoplast-targeted transmembrane proteins in Apicomplexa
Reference
Cilingir, Gokcen, Audrey OT Lau, and Shira L. Broschat. "ApicoAMP: The first computational model for identifying apicoplast-targeted transmembrane proteins in Apicomplexa." Journal of microbiological methods 95.3 (2013): 313-319.
Abstract
Background: Apicomplexan parasites contain a relict chloroplast known as the apicoplast. This organelle is essential for parasite survival and thus serves as a promising target for drug treatment. As the gatekeepers of this important organelle, apicoplast membrane proteins are
potentially excellent drug target candidates and therefore their identification is important. A limited number of apicoplast membrane proteins hav
文 件 列 表
ApicoAMP_CL.py
ApicoAMP_GUI.py
ApicoAMP_helper.py
ApicoAP_fastaHelper.py
config.txt
exampleFasta
AMP_negTraining_11_28_12.fasta
AMP_posTraining_11_28_12.fasta
GUI_splash_ApicoAMP.gif
README.txt
requiredFiles
allApicomplexan_uniqueStrand_11_28_12.idTMtopology_signalpResolved
AllApicomplexan_uniqueStrand_11_28_12_forRealAll.goTermList
GESindex
goTermFeatureMap_11_3_12
svmModels
setup.py
svm_light
LICENSE.txt
svm_classify
svm_learn
svm_trash
