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Whats New
Chimerascan version 0.4.5 (released February 25, 2012) is primarily a bug-fix release.
* Fixed a bug where genes spanning large genomic distances could effectively "mask" gene fusions occuring within their intronic regions.
* Fixed a bug where some fusions were inappropriately reported as "read-through" when in fact they were the result of genomic structural alterations. These fusions will now be reported as "Adjacent_Complex" fusions.
* Added support for GTF gene model files through the new tools script "gtf_to_genepred.py"
* Bowtie now ignores quality scores by default and uses "-v" to align reads in all stages
* Added Ensembl GRCH37 version 65 genes to the Downloads page
Chimerascan version 0.4.3-1 (released October 28, 2011) fixes a bug that introduced false positives whenever long reads (>40bp) were used. Now longer reads should perform extremely well.
Chimerascan version 0.4.3 (release
