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multipop

  • 资源大小:2.18 MB
  • 上传时间:2021-06-30
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资 源 简 介

C++ implementation of spectral methods that allow to compute numerical solutions to diffusion PDEs in population genetics. The code allows to compute the expected multi-population Allele Frequency Spectra in a wide variety of demographic scenarios. Maximum Likelihood methods are implemented for demographic inference from genetic data.

文 件 列 表

MultiPop
.DS_Store
AFS_bins.dat
AFS_examples
compile2.sh
compile3.sh
compile4.sh
eigen-eigen-3.0.1
four_pop.cpp
four_pop.h
integrate.cpp
integrate.hpp
legendre_out.txt
Manual
my_class.cpp
my_class2.cpp
my_class4.cpp
operators.cpp
operators.hpp
optima.hpp
scenario.hpp
three_pop.cpp
three_pop.h
trees.cpp
trees.hpp
two_pop.cpp
two_pop.h

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